Statistics on protein trees
The protein tree pipeline is described at the following page.
This page provides a summary of the
Ensembl phylogenetic analysis of protein families. The following views are available:
Gene tree coverage and Gene QC (per species)
Quick links: Eukaryota, Fornicata, Alveolata, Amoebozoa, Stramenopiles, Rhizaria
Favourite species
| Plasmodium falciparum 3D7 | 5318 | 5306 | 12 | 27 | 5279 |
| 249 | 0 | 0 | 0 |
|
| Dictyostelium discoideum AX4 | 13209 | 11382 | 1827 | 1190 | 10192 |
| 2719 | 0 | 0 | 0 |
|
| Phytophthora infestans T30-4 | 17785 | 16859 | 926 | 503 | 16356 |
| 2907 | 0 | 0 | 0 |
|
| Leishmania major strain Friedlin | 8315 | 8279 | 36 | 7 | 8272 |
| 448 | 0 | 0 | 0 |
|
Eukaryota
| Capsaspora owczarzaki ATCC 30864 | 8758 | 6647 | 2111 | 600 | 6047 |
| 1067 | 0 | 0 | 0 |
|
| Sphaeroforma arctica JP610 | 18213 | 8678 | 9535 | 2709 | 5969 |
| 2707 | 0 | 0 | 0 |
|
| Fonticula alba | 5901 | 3402 | 2499 | 231 | 3171 |
| 415 | 0 | 0 | 0 |
|
| Salpingoeca rosetta | 11624 | 8570 | 3054 | 1164 | 7406 |
| 1754 | 0 | 0 | 0 |
|
| Trypanosoma theileri | 11312 | 10461 | 851 | 1896 | 8565 |
| 2329 | 0 | 0 | 0 |
|
| Leishmania donovani | 8032 | 7813 | 219 | 18 | 7795 |
| 72 | 0 | 0 | 0 |
|
| Phytomonas sp. Hart1 | 6451 | 5652 | 799 | 44 | 5608 |
| 196 | 0 | 0 | 0 |
|
| Naegleria gruberi | 15709 | 11256 | 4453 | 3995 | 7261 |
| 5056 | 0 | 0 | 0 |
|
| Leptomonas seymouri | 8485 | 8105 | 380 | 15 | 8090 |
| 49 | 0 | 0 | 0 |
|
| Phytomonas sp. EM1 | 6381 | 5742 | 639 | 11 | 5731 |
| 104 | 0 | 0 | 0 |
|
| Leptomonas pyrrhocoris | 9872 | 9407 | 465 | 238 | 9169 |
| 1007 | 0 | 0 | 0 |
|
| Tritrichomonas foetus | 25030 | 18875 | 6155 | 8625 | 10250 |
| 12986 | 0 | 0 | 0 |
|
| Strigomonas culicis | 12083 | 10372 | 1711 | 247 | 10125 |
| 5119 | 0 | 0 | 0 |
|
| Monosiga brevicollis MX1 | 9172 | 7238 | 1934 | 415 | 6823 |
| 925 | 0 | 0 | 0 |
|
| Trypanosoma conorhini | 10148 | 9246 | 902 | 638 | 8608 |
| 1044 | 0 | 0 | 0 |
|
| Cryptomonas paramecium | 466 | 259 | 207 | 0 | 259 |
| 7 | 0 | 0 | 0 |
|
| Trypanosoma rangeli SC58 | 7475 | 6952 | 523 | 6 | 6946 |
| 628 | 0 | 0 | 0 |
|
| Leishmania panamensis | 7711 | 7649 | 62 | 0 | 7649 |
| 123 | 0 | 0 | 0 |
|
| Emiliania huxleyi CCMP1516 | 38544 | 32731 | 5813 | 15957 | 16774 |
| 18793 | 0 | 0 | 0 |
|
| Angomonas deanei | 16888 | 14909 | 1979 | 1213 | 13696 |
| 8176 | 0 | 0 | 0 |
|
| Thecamonas trahens ATCC 50062 | 10543 | 7035 | 3508 | 676 | 6359 |
| 1221 | 0 | 0 | 0 |
|
| Trypanosoma equiperdum | 7668 | 6939 | 729 | 560 | 6379 |
| 543 | 0 | 0 | 0 |
|
| Guillardia theta CCMP2712 | 24945 | 15299 | 9646 | 5058 | 10241 |
| 6007 | 0 | 0 | 0 |
|
| Trypanosoma cruzi marinkellei | 10104 | 9723 | 381 | 1921 | 7802 |
| 2789 | 0 | 0 | 0 |
|
| Perkinsela sp. CCAP 1560/4 | 5252 | 3639 | 1613 | 1810 | 1829 |
| 1732 | 0 | 0 | 0 |
|
| Leishmania major strain Friedlin | 8315 | 8279 | 36 | 7 | 8272 |
| 448 | 0 | 0 | 0 |
|
| Leishmania infantum | 8526 | 8393 | 133 | 50 | 8343 |
| 364 | 0 | 0 | 0 |
|
| Chroomonas mesostigmatica CCMP1168 | 505 | 346 | 159 | 46 | 300 |
| 61 | 0 | 0 | 0 |
|
Fornicata
| Spironucleus salmonicida strain ATCC 50377 | 8667 | 4704 | 3963 | 2434 | 2270 |
| 2255 | 0 | 0 | 0 |
|
| Giardia duodenalis strain WB C6 | 4962 | 3059 | 1903 | 250 | 2809 |
| 879 | 0 | 0 | 0 |
|
| Kipferlia bialata | 3622 | 1128 | 2494 | 788 | 340 |
| 584 | 0 | 0 | 0 |
|
Alveolata
| Pseudocohnilembus persalinus | 13179 | 8173 | 5006 | 943 | 7230 |
| 1448 | 0 | 0 | 0 |
|
| Eimeria tenella | 8599 | 6241 | 2358 | 173 | 6068 |
| 403 | 0 | 0 | 0 |
|
| Cyclospora cayetanensis | 7153 | 4922 | 2231 | 80 | 4842 |
| 100 | 0 | 0 | 0 |
|
| Plasmodium reichenowi ASM160185v1 | 5040 | 4912 | 128 | 4 | 4908 |
| 23 | 0 | 0 | 0 |
|
| Babesia ovata | 5031 | 4497 | 534 | 770 | 3727 |
| 1169 | 0 | 0 | 0 |
|
| Eimeria praecox | 7635 | 4259 | 3376 | 32 | 4227 |
| 156 | 0 | 0 | 0 |
|
| Babesia sp. Xinjiang | 3066 | 2945 | 121 | 54 | 2891 |
| 325 | 0 | 0 | 0 |
|
| Plasmodium knowlesi strain H | 5328 | 5309 | 19 | 243 | 5066 |
| 338 | 0 | 0 | 0 |
|
| Eimeria acervulina | 6867 | 5842 | 1025 | 51 | 5791 |
| 113 | 0 | 0 | 0 |
|
| Eimeria brunetti | 8711 | 5802 | 2909 | 83 | 5719 |
| 409 | 0 | 0 | 0 |
|
| Babesia bigemina | 5079 | 4707 | 372 | 633 | 4074 |
| 1002 | 0 | 0 | 0 |
|
| Besnoitia besnoiti | 8224 | 7576 | 648 | 368 | 7208 |
| 777 | 0 | 0 | 0 |
|
| Cryptosporidium meleagridis | 3753 | 3718 | 35 | 0 | 3718 |
| 3 | 0 | 0 | 0 |
|
| Cryptosporidium muris RN66 | 3934 | 3894 | 40 | 2 | 3892 |
| 20 | 0 | 0 | 0 |
|
| Plasmodium relictum | 345 | 330 | 15 | 59 | 271 |
| 203 | 0 | 0 | 0 |
|
| Ichthyophthirius multifiliis | 8056 | 6330 | 1726 | 157 | 6173 |
| 1238 | 0 | 0 | 0 |
|
| Toxoplasma gondii ME49 | 8138 | 7999 | 139 | 0 | 7999 |
| 64 | 0 | 0 | 0 |
|
| Stylonychia lemnae | 20740 | 13520 | 7220 | 4788 | 8732 |
| 6533 | 0 | 0 | 0 |
|
| Plasmodium gaboni | 5198 | 5089 | 109 | 21 | 5068 |
| 95 | 0 | 0 | 0 |
|
| Plasmodium falciparum 3D7 | 5318 | 5306 | 12 | 27 | 5279 |
| 249 | 0 | 0 | 0 |
|
| Toxoplasma gondii VEG | 8410 | 8038 | 372 | 8 | 8030 |
| 122 | 0 | 0 | 0 |
|
| Plasmodium inui San Antonio 1 | 5832 | 5317 | 515 | 416 | 4901 |
| 432 | 0 | 0 | 0 |
|
| Plasmodium vinckei petteri | 5160 | 5061 | 99 | 59 | 5002 |
| 221 | 0 | 0 | 0 |
|
| Eimeria maxima | 6057 | 5175 | 882 | 63 | 5112 |
| 183 | 0 | 0 | 0 |
|
| Plasmodium ovale curtisi Poc2 | 8625 | 7502 | 1123 | 1760 | 5742 |
| 2321 | 0 | 0 | 0 |
|
| Theileria parva | 4079 | 3602 | 477 | 280 | 3322 |
| 360 | 0 | 0 | 0 |
|
| Gregarina niphandrodes | 6375 | 3620 | 2755 | 1430 | 2190 |
| 1422 | 0 | 0 | 0 |
|
| Hammondia hammondi | 8003 | 7545 | 458 | 8 | 7537 |
| 41 | 0 | 0 | 0 |
|
| Theileria orientalis strain Shintoku | 4002 | 3557 | 445 | 172 | 3385 |
| 249 | 0 | 0 | 0 |
|
| Plasmodium fragile | 5672 | 5487 | 185 | 547 | 4940 |
| 593 | 0 | 0 | 0 |
|
| Cystoisospora suis | 11543 | 6586 | 4957 | 359 | 6227 |
| 583 | 0 | 0 | 0 |
|
| Plasmodium gallinaceum | 5246 | 5102 | 144 | 266 | 4836 |
| 360 | 0 | 0 | 0 |
|
| Stentor coeruleus | 31426 | 28102 | 3324 | 13270 | 14832 |
| 19494 | 0 | 0 | 0 |
|
| Plasmodium sp. DRC-Itaito PGABG02 | 94 | 55 | 39 | 12 | 43 |
| 17 | 0 | 0 | 0 |
|
| Theileria equi strain WA | 5329 | 4845 | 484 | 1249 | 3596 |
| 1436 | 0 | 0 | 0 |
|
| Plasmodium berghei ANKA | 4945 | 4938 | 7 | 0 | 4938 |
| 164 | 0 | 0 | 0 |
|
| Paramecium tetraurelia | 39642 | 34399 | 5243 | 14135 | 20264 |
| 22405 | 0 | 0 | 0 |
|
| Plasmodium coatneyi | 5516 | 5459 | 57 | 336 | 5123 |
| 609 | 0 | 0 | 0 |
|
| Oxytricha trifallax Oxytricha_MIC_v2.0 | 810 | 468 | 342 | 357 | 111 |
| 348 | 0 | 0 | 0 |
|
| Cryptosporidium parvum Iowa II | 3805 | 3704 | 101 | 0 | 3704 |
| 27 | 0 | 0 | 0 |
|
| Cryptosporidium ubiquitum | 3766 | 3701 | 65 | 0 | 3701 |
| 6 | 0 | 0 | 0 |
|
| Plasmodium chabaudi chabaudi strain AS | 5157 | 5149 | 8 | 63 | 5086 |
| 240 | 0 | 0 | 0 |
|
| Plasmodium cynomolgi strain B | 5716 | 5423 | 293 | 342 | 5081 |
| 468 | 0 | 0 | 0 |
|
| Plasmodium malariae Pmal | 6343 | 5643 | 700 | 1047 | 4596 |
| 1066 | 0 | 0 | 0 |
|
| Babesia bovis T2Bo | 3955 | 3809 | 146 | 313 | 3496 |
| 381 | 0 | 0 | 0 |
|
| Cryptosporidium andersoni | 3876 | 3844 | 32 | 0 | 3844 |
| 1 | 0 | 0 | 0 |
|
| Tetrahymena thermophila SB210 | 24725 | 17461 | 7264 | 4180 | 13281 |
| 7178 | 0 | 0 | 0 |
|
| Eimeria mitis strain Houghton | 10076 | 5845 | 4231 | 334 | 5511 |
| 904 | 0 | 0 | 0 |
|
| Perkinsus marinus ATCC 50983 | 23474 | 18816 | 4658 | 8877 | 9939 |
| 11725 | 0 | 0 | 0 |
|
| Plasmodium yoelii yoelii | 7861 | 5817 | 2044 | 953 | 4864 |
| 1305 | 0 | 0 | 0 |
|
| Symbiodinium microadriaticum | 43403 | 28384 | 15019 | 16702 | 11682 |
| 17462 | 0 | 0 | 0 |
|
| Plasmodium sp. gorilla clade G2 | 344 | 333 | 11 | 0 | 333 |
| 79 | 0 | 0 | 0 |
|
| Plasmodium gonderi | 5916 | 5831 | 85 | 731 | 5100 |
| 785 | 0 | 0 | 0 |
|
Amoebozoa
| Dictyostelium purpureum | 12399 | 11009 | 1390 | 1173 | 9836 |
| 2554 | 0 | 0 | 0 |
|
| Entamoeba invadens IP1 | 9925 | 8665 | 1260 | 1492 | 7173 |
| 3587 | 0 | 0 | 0 |
|
| Tieghemostelium lacteum | 10225 | 8995 | 1230 | 1297 | 7698 |
| 1731 | 0 | 0 | 0 |
|
| Entamoeba nuttalli P19 | 6187 | 5955 | 232 | 13 | 5942 |
| 46 | 0 | 0 | 0 |
|
| Acanthamoeba castellanii str. Neff | 14935 | 10831 | 4104 | 2465 | 8366 |
| 3342 | 0 | 0 | 0 |
|
| Entamoeba histolytica HM-1:IMSS | 8113 | 7978 | 135 | 71 | 7907 |
| 1029 | 0 | 0 | 0 |
|
| Planoprotostelium fungivorum | 17124 | 12558 | 4566 | 4168 | 8390 |
| 5350 | 0 | 0 | 0 |
|
| Dictyostelium discoideum AX4 | 13209 | 11382 | 1827 | 1190 | 10192 |
| 2719 | 0 | 0 | 0 |
|
| Entamoeba dispar SAW760 | 8811 | 8444 | 367 | 225 | 8219 |
| 1638 | 0 | 0 | 0 |
|
| Cavenderia fasciculata | 12165 | 9804 | 2361 | 1942 | 7862 |
| 2653 | 0 | 0 | 0 |
|
Stramenopiles
| Thalassiosira pseudonana CCMP1335 | 11672 | 10505 | 1167 | 418 | 10087 |
| 1171 | 0 | 0 | 0 |
|
| Phytophthora nicotianae P1569 | 23159 | 19707 | 3452 | 580 | 19127 |
| 2049 | 0 | 0 | 0 |
|
| Achlya hypogyna | 14406 | 14015 | 391 | 71 | 13944 |
| 724 | 0 | 0 | 0 |
|
| Saprolegnia parasitica CBS 223.65 | 20121 | 18691 | 1430 | 257 | 18434 |
| 3060 | 0 | 0 | 0 |
|
| Fragilariopsis cylindrus CCMP1102 | 18082 | 14799 | 3283 | 2240 | 12559 |
| 3301 | 0 | 0 | 0 |
|
| Nannochloropsis gaditana CCMP526 | 3554 | 2297 | 1257 | 340 | 1957 |
| 441 | 0 | 0 | 0 |
|
| Ectocarpus siliculosus | 16269 | 11064 | 5205 | 2248 | 8816 |
| 2934 | 0 | 0 | 0 |
|
| Blastocystis hominis | 6020 | 4145 | 1875 | 711 | 3434 |
| 1424 | 0 | 0 | 0 |
|
| Phytophthora kernoviae 00238/432 | 10650 | 8555 | 2095 | 110 | 8445 |
| 310 | 0 | 0 | 0 |
|
| Phytophthora lateralis MPF4 | 11635 | 10192 | 1443 | 225 | 9967 |
| 635 | 0 | 0 | 0 |
|
| Pythium aphanidermatum DAOM BR444 | 12305 | 11571 | 734 | 70 | 11501 |
| 878 | 0 | 0 | 0 |
|
| Aureococcus anophagefferens | 11520 | 9221 | 2299 | 1254 | 7967 |
| 2503 | 0 | 0 | 0 |
|
| Globisporangium iwayamae DAOM BR242034 | 15248 | 13877 | 1371 | 313 | 13564 |
| 1662 | 0 | 0 | 0 |
|
| Pythium arrhenomanes ATCC 12531 | 13805 | 12587 | 1218 | 263 | 12324 |
| 1536 | 0 | 0 | 0 |
|
| Phytopythium vexans DAOM BR484 | 11957 | 11330 | 627 | 154 | 11176 |
| 990 | 0 | 0 | 0 |
|
| Hyaloperonospora arabidopsidis Emoy2 | 14321 | 10944 | 3377 | 1981 | 8963 |
| 2680 | 0 | 0 | 0 |
|
| Phytophthora nicotianae ASM148298v1 | 10521 | 10282 | 239 | 4 | 10278 |
| 585 | 0 | 0 | 0 |
|
| Globisporangium irregulare DAOM BR486 | 13804 | 13133 | 671 | 108 | 13025 |
| 861 | 0 | 0 | 0 |
|
| Globisporangium ultimum DAOM BR144 | 15288 | 14086 | 1202 | 212 | 13874 |
| 1847 | 0 | 0 | 0 |
|
| Aphanomyces invadans strain NJM9701 | 15248 | 13832 | 1416 | 306 | 13526 |
| 1049 | 0 | 0 | 0 |
|
| Phytophthora cactorum | 23869 | 21556 | 2313 | 1155 | 20401 |
| 3557 | 0 | 0 | 0 |
|
| Phytophthora palmivora | 24674 | 22890 | 1784 | 1875 | 21015 |
| 8615 | 0 | 0 | 0 |
|
| Thraustotheca clavata | 13174 | 12345 | 829 | 168 | 12177 |
| 1093 | 0 | 0 | 0 |
|
| Phytophthora megakarya | 34804 | 32066 | 2738 | 4628 | 27438 |
| 13490 | 0 | 0 | 0 |
|
| Thalassiosira oceanica | 34500 | 25026 | 9474 | 12565 | 12461 |
| 12658 | 0 | 0 | 0 |
|
| Phytophthora sojae strain P6497 | 26489 | 24955 | 1534 | 2014 | 22941 |
| 7233 | 0 | 0 | 0 |
|
| Hondaea fermentalgiana | 11853 | 8460 | 3393 | 1292 | 7168 |
| 1890 | 0 | 0 | 0 |
|
| Nothophytophthora sp. Chile5 | 27122 | 26131 | 991 | 1072 | 25059 |
| 12160 | 0 | 0 | 0 |
|
| Saprolegnia diclina VS20 | 17359 | 16774 | 585 | 191 | 16583 |
| 1037 | 0 | 0 | 0 |
|
| Plasmopara halstedii | 15469 | 10662 | 4807 | 867 | 9795 |
| 1203 | 0 | 0 | 0 |
|
| Pseudo-nitzschia multistriata | 11895 | 10001 | 1894 | 184 | 9817 |
| 650 | 0 | 0 | 0 |
|
| Aphanomyces astaci strain APO3 | 19119 | 16965 | 2154 | 1382 | 15583 |
| 3407 | 0 | 0 | 0 |
|
| Peronospora effusa Peff_R14 | 8569 | 7836 | 733 | 248 | 7588 |
| 441 | 0 | 0 | 0 |
|
| Phaeodactylum tricornutum CCAP 1055/1 | 12178 | 10323 | 1855 | 841 | 9482 |
| 1617 | 0 | 0 | 0 |
|
| Phytophthora infestans T30-4 | 17785 | 16859 | 926 | 503 | 16356 |
| 2907 | 0 | 0 | 0 |
|
| Phytophthora ramorum | 15605 | 15422 | 183 | 160 | 15262 |
| 2707 | 0 | 0 | 0 |
|
Rhizaria
| Bigelowiella natans CCMP2755 | 21706 | 12377 | 9329 | 2566 | 9811 |
| 3419 | 0 | 0 | 0 |
|
| Plasmodiophora brassicae | 9727 | 6862 | 2865 | 1073 | 5789 |
| 1539 | 0 | 0 | 0 |
|
| Reticulomyxa filosa | 39963 | 27877 | 12086 | 18441 | 9436 |
| 18535 | 0 | 0 | 0 |
|
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